Things I need to do within the next 36 hours: 
1) Write up my annual PhD candidate progress report.
2) Convince a leading opiate addiction expert that I can construct a tractable thesis project centered on the effects of chronic opiate exposure on the dentate gyrus of the hippocampus.
3) Convince a leading stem cell expert that I can construct a tractable thesis project centered on the effects of chronic opiate exposure on specific stem and progenitor cell compartments within the dentate gyrus of the hippocampus.
4) Convince a leading chromatin biology and epigenetics expert (and potential Nobel laureate) that I that I can construct a tractable thesis project centered on the effects of chronic opiate exposure—as mediated by alterations in chromatin structure and epigenetic machinery—on specific stem and progenitor cell compartments within the dentate gyrus of the hippocampus.
5) READ READ READ so that I can do 2, 3, and 4 without sounding like an idiot.
So I’m gonna be super responsible and have a Red Stripe at 2:40 in the morning. 

Things I need to do within the next 36 hours: 

1) Write up my annual PhD candidate progress report.

2) Convince a leading opiate addiction expert that I can construct a tractable thesis project centered on the effects of chronic opiate exposure on the dentate gyrus of the hippocampus.

3) Convince a leading stem cell expert that I can construct a tractable thesis project centered on the effects of chronic opiate exposure on specific stem and progenitor cell compartments within the dentate gyrus of the hippocampus.

4) Convince a leading chromatin biology and epigenetics expert (and potential Nobel laureate) that I that I can construct a tractable thesis project centered on the effects of chronic opiate exposure—as mediated by alterations in chromatin structure and epigenetic machinery—on specific stem and progenitor cell compartments within the dentate gyrus of the hippocampus.

5) READ READ READ so that I can do 2, 3, and 4 without sounding like an idiot.

So I’m gonna be super responsible and have a Red Stripe at 2:40 in the morning. 

This is me attempting to give a fuck about tubulin because I have to give a microtubule-themed presentation on Tuesday morning. I have something to talk about, but it’s not very exciting and oh my god I am so bored with this shit.
Also, I got new glasses this weekend. 

This is me attempting to give a fuck about tubulin because I have to give a microtubule-themed presentation on Tuesday morning. I have something to talk about, but it’s not very exciting and oh my god I am so bored with this shit.

Also, I got new glasses this weekend. 

I knew this day was coming. 
If I’m going to get into the nitty gritty of bioinformatics, I’m going to have to learn C++.

I knew this day was coming. 

If I’m going to get into the nitty gritty of bioinformatics, I’m going to have to learn C++.

I’ve been aligning sequence data all day, so in ten minutes, I’m going to go get drunk at RockU happy hour.*
*I would have gone anyway, but I like to justify my drinking. 

I’ve been aligning sequence data all day, so in ten minutes, I’m going to go get drunk at RockU happy hour.*

*I would have gone anyway, but I like to justify my drinking. 

Need to read all of these so that I can formulate a lesson plan for the second session of my PI’s stem cells crash course tomorrow. 
Highly Efficient Reprogramming to Pluripotency and Directed Differentiation of Human Cells with Synthetic Modified mRNA
Telomere Lenth and iPSC Reprogramming: Survival of the Longest
Balancing Out the Ends during iPSC Nuclear Reprogramming
A Transcriptional Roadmap to the Induction of Pluripotency in Somatic Cells
Disease-Specific Induced Pluripotent Stem Cells
Neural Differentiation of Human Induced Pluripotent Stem Cels Follows Developmental Principles but with Variable Potency

Need to read all of these so that I can formulate a lesson plan for the second session of my PI’s stem cells crash course tomorrow. 


This approach is a basic component of the drug addiction genetics project I’m working on right now, only I work with extant humans. 

Definitely worth a view if you’re interested in human origins.

www.youtube.com/watch?feature=player_embedded&v=Ot9PSqe6bJY

He names fucking Ununoctium. What a champ!

More terrible science news →

Currently, NIH-funded research must become available to the public after no more than 12 months following acceptance for publication. The Research Works Act would change that by essentially broadening the definition of “private-sector” research work to include work that is now considered open-access and placing such it behind publisher fee barriers. 

Absolute bullshit.

Murdered Scientists →

In January, 2010, a remote-controlled bomb attached to a motorcyclekilled Masoud Ali Mohammadi, 50, who “taught neutron physics at Tehran University.” In November, 2010, two separate car bombs exploded within minutes of each other on the same day, one that killed nuclear scientist Majid Shahriar and wounded his wife, and the other which wounded another nuclear scientist, Fereidoun Abbasi, along with his wife. Then, in July of last year, Darioush Rezaei, 35, was shot dead and his wife was wounded by two gunmen firing from motorcycles outside of their daughter’s kindergarten; Rezaei “did his doctorate in neutron transport – which lies at the heart of nuclear chain reactions in reactors and bombs” and “was a member of the Atomic Energy Organization of Iran, the country’s official atomic energy commission.”

And now, yet another Iranian scientist has been killed. According to Iranian media, a 32-year-old university professor, Mostafa Ahmadi-Roshan, died when an assailant riding on a motorcycle attached a magnetic bomb to his car, which then detonated and killed him. According to The Washington Post‘s Thomas Erdbrink, a conservative news outlet in Iran reported that the young scientist “was believed to be involved in procuring materials for Iran’s main nuclear enrichment facility in Natanz.”

A couple of things:

1) If I ever said that science was always a safe career choice, here is proof of the contrary. 

2) This is pretty egregious, huh? 

Demographic and drug dependence data! 

Demographic and drug dependence data! 

work work work work work work

write write write write write write

Two things.

First trip to the dentist in a while today. Need a lot of work. Luckily, my dental benefits for the year are untouched, and I can get some of pretty expensive work done before I lose my 2011 dental moneys. BUT will definitely have to do some of it out-of-pocket. I’m okay with that, but hopefully we can break it up so that I can maximize my yearly allowance. We shall see.

Apparently, I eat too many carbs and my diet is poor (it’s not). I don’t drink much soda, no juice, use minimal sugar in my coffee, eat very little dried fruit (except for raisins every now and then), and eat whole wheat everything. 

That leaves cookies, which I will not give up. I will figure something out. 

~

I’m currently taking a break from writing a Cell-style minireview on the neural crest stem cell lineage for my stem cells class. It’s a vast topic, which is great and not-great at the same time. There’s no dearth of things to write about, but I think I may be trying to accomplish too much in what shouldn’t be more than a 3500-word article. 

I’m about halfway done. It’s due tomorrow at 5ish. I feel good. 

I think…

I found my first rotation lab today. 

I’ve never really thought seriously about studying the biological bases of addiction and addictive behavior, but I really liked the approaches (and more generally the attitude) that this PI employs. Also! There’s a huge potential for me to use my existing behavior/psychology/neuroscience background to do something that dovetails pretty nicely with my interest in disproportionately affected populations. 

I’m finding more and more that I can’t escape my translational biology heritage.

ifitseasy:

all-the-lights:

amymariani:

New Drug Can Treat Almost Any Viral Infection By Killing the Body’s Infected Cells



A few thoughts (some of which the original article touches upon):
I’d like to see a study of comparative delivery methods. 
DRACO makes use of a caspase-mediated apoptosis pathways; are caspase-independent pathways completely uninvolved/affected?
How is DRACO efficacy related to time of infection? Can it be used as prophylaxis? Is it effective against chronic or systemic infections?
How much cell-death can DRACOs induce? Would a chronic infection produce too much apoptotic cell death? 
Mammalian cells do actually produce a certain amount of dsRNA. Is this completely untouched?
Questions and concerns aside, this is a pretty cool approach. I just read the original article and it shows a pretty nice proof-of-concept. 
SIDEBAR: PLoS ONE is not a very high-impact journal, but that’s just the science snob in me talking. POLITICS!
ADDITIONAL SIDEBAR: Always read the original articles if you can, my non-nerds. 

ifitseasy:

all-the-lights:

amymariani:

New Drug Can Treat Almost Any Viral Infection By Killing the Body’s Infected Cells

A few thoughts (some of which the original article touches upon):

Questions and concerns aside, this is a pretty cool approach. I just read the original article and it shows a pretty nice proof-of-concept. 

SIDEBAR: PLoS ONE is not a very high-impact journal, but that’s just the science snob in me talking. POLITICS!

ADDITIONAL SIDEBAR: Always read the original articles if you can, my non-nerds.